BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039A09SP1|AL430643
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1771 1734 0.0
>3x_Contig1771
Length = 25932
Score = 1734 bits (874), Expect = 0.0
Identities = 889/892 (99%), Gaps = 2/892 (0%)
Strand = Plus / Plus
Query: 1 gatctcactttagggtttctaagttcagatttttttgcaggtttctttggtgcaa-ttta 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10568 gatctcactttagggtttctaagttcagatttttttgcaggtttctttggtgcaacttta 10627
Query: 60 ccgttctttttaccgttgcatttggactcttcgtcggtggtaccctgagacaatctaatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10628 ccgttctttttaccgttgcatttggactcttcgtcggtggtaccctgagacaatctaatt 10687
Query: 120 ttttggaaaacctcggagaattcgtccactggatcagtgtcgatgatgttgtacttggcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10688 ttttggaaaacctcggagaattcgtccactggatcagtgtcgatgatgttgtacttggcg 10747
Query: 180 gtagaagccttgctagagtccttgctagagtccttgctagaatttcttttctttggtgga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10748 gtagaagccttgctagagtccttgctagagtccttgctagaatttcttttctttggtgga 10807
Query: 240 ggcggaactgcctttttcgcctttctttgtgcagcaaccgtttcggcgatatcatcgtga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10808 ggcggaactgcctttttcgcctttctttgtgcagcaaccgtttcggcgatatcatcgtga 10867
Query: 300 tccttgaaattcctggaagagaagacaggtccggattcgtttaaatcgatctcgtcatcg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10868 tccttgaaattcctggaagagaagacaggtccggattcgtttaaatcgatctcgtcatcg 10927
Query: 360 gattcatcttcaaacgattttttgaccttcccattctttgcactcttctttttcttttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10928 gattcatcttcaaacgattttttgaccttcccattctttgcactcttctttttcttttta 10987
Query: 420 tcggagtcacctccaattctcactgacaacggtttgttaccattgaattcagtgccatca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10988 tcggagtcacctccaattctcactgacaacggtttgttaccattgaattcagtgccatca 11047
Query: 480 tcgtcgctgatgtccacgtccgagtgacgatcatagccgcggtaacgtccaggacgttca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11048 tcgtcgctgatgtccacgtccgagtgacgatcatagccgcggtaacgtccaggacgttca 11107
Query: 540 ggctcattcagagttccgttaatcactttagggtttggttttggtttcggttttggtttc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11108 ggctcattcagagttccgttaatcactttagggtttggttttggtttcggttttggtttc 11167
Query: 600 gggttttttccggaatttttttggaccctgacatcgaaatcttcttcatttccagacaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11168 gggttttttccggaatttttttggaccctgacatcgaaatcttcttcatttccagacaaa 11227
Query: 660 ttacgggcagaacctctcgaaggaaaattatcaggtctcgagacagattgaccgcctttc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11228 ttacgggcagaacctctcgaaggaaaattatcaggtctcgagacagattgaccgcctttc 11287
Query: 720 atactcatcagcatctcatagtcctctttttgacaccacaaactcaccctgtgagtgctc 779
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 11288 atactcatcagcatctcatagtcctc-ttttgacaccacaaactcaccctgtgagtgctc 11346
Query: 780 tctgtccctataaacatcgtcgaactttgagatcctacgagtaccgtttcccaaattttc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11347 tctgtccctataaacatcgtcgaactttgagatcctacgagtaccgtttcccaaattttc 11406
Query: 840 ataatgaccattgttgtcatctcggtcacgagccgaaamgcttgaatcacca 891
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 11407 ataatgaccattgttgtcatctcggtcacgagccgaaacgcttgaatcacca 11458
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6903
Number of Sequences: 1807
Number of extensions: 6903
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)